Recent submissions

Comment · 7 months ago
Post-mandate, I've been submitting to closed access journals and getting OA on the side for free due to the mandate. Pre-mandate, I only submitted to paid OA journals, and paid ~ $3k each time for it.

The article claims the solution is "every government grant should stipulate that the research it supports can’t be published in a for-profit journal. That’s it! If the public paid for it, it shouldn’t be paywalled." That's an equivocation fallacy. Whether a for-profit journal publishes the work at some point is orthogonal to whether it is available un-paywalled, which it now must be.

You say that publishers replaced subscription fees with APC charges, but I haven't seen this happening when I've submitted papers recently. Journals need new submissions or they lose mindshare. Authors are price-sensitive and will shop around. Starting a new journal isn't that hard (it can been done as a side project) so high margins will likely be undercut. I have no idea why the author chose to pay a $12k APC; they probably didn't need to. Finally, closed-access journals will have residual subscription income from their closed-access archives for many decades; if the author wants to kill that income stream off, their proposed solution will not do it. So while I agree with the article's condemnation of the publishers, who are certainly no friends of science, I think it's wildly off-base on pretty much every other point.

Author-pays APCs are even potentially a good thing as long as they aren't much higher than the cost of publication. Universal APCs would provide some pressure against publishing many low-value papers that aren't really worth the time it takes to read them. The paper spam is kind of getting out of control.

Comment · 8 months ago
Comment · 8 months ago
Comment · 1 year ago
Evaluating a function using a densely spaced grid and plotting it does work. This is brute-force search. You will see the global minima immediately in the way you describe, provided your grid is dense enough to capture all local variation.

It's just that when the function is implemented on the computer, evaluating so many points takes a long time, and using a more sophisticated optimization algorithm that exploits information like the gradient is almost always faster. In physical reality all the points already exist, so if they can be observed cheaply the brute force approach works well.

Edit: Your question was good. Asking superficially-naive questions like that is often a fruitful starting point for coming up with new tricks to solve seemingly-intractable problems.

Comment · 1 year ago
From main text:

> Discussions with different stakeholders suggest that many currently perceive systematic fraudulent science as something that occurs only in the periphery of the “real” scientific enterprise, that is, outside OECD countries. Accumulating evidence shows that systematic production of low quality and fraudulent science can occur anywhere.

From supplement (section about the output of the "ARDA" paper mill):

> We obtained 20,638 documents and were able to impute country of authorship for 13,288 documents (64.4%). Of these documents, more than half were solely from India (26.4%), Iraq (19.3%), or Indonesia (12.2%).

The identity and reputation of the authors, and the publication venue, is (for now) still a strong signal when evaluating the credibility of an article.

The article is spot-on though in that there is a real risk of paper mills infecting formerly reliable journals, and this is not helped by the publishers' commercialism. For example, it used to be easy to ignore Hindawi journals (they are characteristically low quality); then Wiley started publishing them under its own brand. The good is now mixed with the bad under the same label. Practicing scientists can fall back on whether they know the authors personally but that doesn't really help non-practicing professionals or the general public.

Comment · 1 year ago
True, but the RF coils do get turned on & off. Heating of non-magnetic metal from the radio waves used for scanning is another concern, not just magnetic force.
Comment · 1 year ago
Comment · 1 year ago
Even extremely privacy-conscious authors could submit their paper to the service at the same time they publish their preprint v1, then if the service's feedback is useful, publish preprint v2 and submit v2 as the version of record.
Comment · 1 year ago
Industry research is generally R&D (applied science, engineering research), not basic research (basic science). Not to disparage either; both are needed, but they are quite different and a person may be suited to one but not the other. It can be hard for someone looking for work to determine where an organization's focus is, as an outsider.
Comment · 1 year ago
Multiple comparisons and sequential hypothesis testing / early stopping aren't the same problem. There might be a way to wrangle an F test into a sequential hypothesis testing approach, but it's not obvious (to me anyway) how one would do so. In multiple comparisons each additional comparison introduces a new group with independent data; in sequential hypothesis testing each successive test adds a small amount of additional data to each group so all results are conditional. Could you elaborate or provide a link?
Comment · 1 year ago
Publications with public funding have already escaped the paywall, partially as of 2013 and completely as of this year:

https://par.nsf.gov/

https://pmc.ncbi.nlm.nih.gov/

https://ospo.gwu.edu/overview-us-policy-open-access-and-open...

https://www.nih.gov/about-nih/who-we-are/nih-director/statem...

https://www.coalition-s.org/plan_s_principles/

The intent of the Bayh-Dole Act was to deal with a perceived problem of government-owned patents being investor-unfriendly. At the time the government would only grant non-exclusive licenses, and investors generally want exclusivity. That may have been the actual problem, moreso than who owned the patent. On the other hand, giving the actual inventors an incentive to commercialize their work should increase their productivity and the chance that the inventions actually get used.

Comment · 1 year ago
Once something has a predictable ROI (can be productized and sold), profit seekers will find a way. The role of publicly funded research is to get ideas that are not immediately profitable to the stage that investors can take over. Publicly funded research also supports investor-funded R&D by educating their future work force.

The provided examples do not clearly support the idea that industry can compensate for a decrease in government-funded basic research. Bell Labs was the product of government action (antitrust enforcement), not a voluntary creation. The others are R&D (product development) organizations, not research organizations. Of those listed, Xerox PARC is the most significant, but from the profit-seeking perspective it's more of a cautionary tale since it primarily benefited Xerox's competitors. And Hinton seems to have received government support; his backpropagation paper at least credits ONR. As I understand it, the overall deep learning story is that basic research, including government-funded research, laid theoretical groundwork that capital investment was later able to scale commercially once video games drove development of the necessary hardware.

Comment · 1 year ago
The median sample size of the studies subjected to replication was n = 5 specimens (https://osf.io/atkd7). Probably because only protocols with an estimated cost less than BRL 5,000 (around USD 1,300 at the time) per replication were included. So it's not surprising that only ~ 60% of the original biomechemical assays' point estimates were in the replicates' 95% prediction interval. The mouse maze anxiety test (~ 10%) seems to be dragging down the average. n = 5 just doesn't give reliable estimates, especially in rodent psychology.
Comment · 1 year ago
I can confirm that some (30%?) mechanical and biomedical engineers follow the described problem "solving" strategy exactly. It's not just software engineers.
Comment · 1 year ago
Prioritize work by ROI and alignment with the institution's mission, communicate the prioritization to relevant decision-makers in your management chain, and actually follow through on it unless coerced otherwise.

Edit: There's no guarantee this will work out positively—nothing is guaranteed—but it's worth considering if the alternative is giving up / changing careers.

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