I don't get why you process the whole connector board at once. If I understand correctly, you're connecting individual & identic boards to your board. So each connector on you giant board is actually dealing a bunch of small board right?
In that case, can't you exploit the inherent symmetry in the design here to only route a quarter of your connectors and then mirror/rotate the result for the other one? Or, if you have a X*X matrix, route one size minus the corners and replicate to the other sides?
Also, with such a huge connection board, it smells a NIH issue here. I think you'd better serialize the IO to a bus (whatever) and few lines and perform the connection in software (in a GoWin FPGA for example, both extremely cheap and quite powerful). Just think of the harness you'll need to build to fit the connectors in. The obvious routing bugs, and so on. Any maintenance will be a nightmare, if you need to swap 2 pins on a connector or re-run the routing.
In that case, can't you exploit the inherent symmetry in the design here to only route a quarter of your connectors and then mirror/rotate the result for the other one? Or, if you have a X*X matrix, route one size minus the corners and replicate to the other sides?
Also, with such a huge connection board, it smells a NIH issue here. I think you'd better serialize the IO to a bus (whatever) and few lines and perform the connection in software (in a GoWin FPGA for example, both extremely cheap and quite powerful). Just think of the harness you'll need to build to fit the connectors in. The obvious routing bugs, and so on. Any maintenance will be a nightmare, if you need to swap 2 pins on a connector or re-run the routing.