Flags are applied by users in virtually all cases, not mods.
Contentious topics, regardless of how merited a discussion might be, tend to draw flags inordinately. But again, you generally can't blame mods for this.
(HN does systemically penalise, or outright ban, numerous sites. I strongly doubt Wired is in either category, though if you want to know for certain, you can email mods. For a number of fairly evident reasons the full list isn't publicly disclosed, though pg provided some lists and extracts early in HN's histoyry, notably <https://news.ycombinator.com/item?id=499044> and <https://news.ycombinator.com/item?id=4984095>. There were 38,719 banned sites as of the end of 2012, a number which has doubtless increased.)
Contentious topics, regardless of how merited a discussion might be, tend to draw flags inordinately. But again, you generally can't blame mods for this.
(HN does systemically penalise, or outright ban, numerous sites. I strongly doubt Wired is in either category, though if you want to know for certain, you can email mods. For a number of fairly evident reasons the full list isn't publicly disclosed, though pg provided some lists and extracts early in HN's histoyry, notably <https://news.ycombinator.com/item?id=499044> and <https://news.ycombinator.com/item?id=4984095>. There were 38,719 banned sites as of the end of 2012, a number which has doubtless increased.)